Coupled evolutionary rates and the fossil record

A model for speciation is given in which a taxon’s phenotypic variation and concomitant variation in fitness are related to gradients within the environment. Phenotypic expressions within the population are shown to undergo abrupt transitions as a result of discontinuous fitness-functions. Evidence for rapid and abrupt phenotypic variation is explored by analyses of speciation (= origination) rates within the fossil record. In general, a high correlation exists among the area/volume changes of sedimentary rocks known for each geologic period and the apparent speciation rates seen in selected vascular/non-vascular plant groups. Regressions of speciation rates on rock area/volume plots indicate that the Devonian, Carboniferous, and Permian show significant divergences (= residual) rates from predicted origination rates. The Cretaceous shows the highest residual value as a consequence of the rapid appearance of angiosperm fossils. A similar pattern in diversity changes for the mandibulate terrestrial invertebrates is also apparent. The coupled evolution of the angiosperms with specific insect groups appears to be the most tenable explanation for the residual Cretaceous origination rate of the former group. It is postulated that the angiospems have evolved in part as the result of a phytochemical cost-function such that phytophagous insects are warded off, while potential pollinators are favored. Quantitative/qualitative differences observed in the distribution of secondary metabolites may be evidence for coupled evolution. A “predatorprey mediated co-existence” between phytophagous insects and angiosperms may have served as a factor in allowing the co-existence of less than optimal plant species providing an impetus for relatively rapid speciation turnover.     

Ontogenetic constructions of some fossil plants

This article presents a survey of ontogenetic studies in paleobotany, and of biologically relevant mathematical results available from such techniques as finite element analyses, algorithmic systems, and computer simulation. Dynamic representations of growth are possible when the observed cellular arrangements in fossils are mathematically described. Successive computer solutions of parameterizing equations allow for the extrapolation of ontogenetic trends forwards and backwards in time (i.e., more and less mature stages, respectively), as well as the interpolation of missing stages or portions of an organism's development. The hypothetical constructions derived from these techniques may be tested against direct comparisons with the fossil being simulated and/pr proposed modern analogues. Similarly, multicellular organisms or portions of organisms (e.g., leaves, sporangia) may be constructed as arrays of symbols — each symbol representing a cell or group of cells. Development in such models is simulated by providing instructions for cell division, cell death, or alteration in cellular states, e.g., vegetative to reproductive. Illustrative simulations of Parka, Mastopora, Rhynia and Calamites are presented and paleobotanical conclusions concerning their respective growth patterns are drawn.     

AI for in-line vehicle sequence controlling: development and evaluation of an adaptive machine learning artifact to predict sequence deviations in a mixed-model production line

Flexible Services and Manufacturing Journal - Customers in the manufacturing sector, especially in the automotive industry, have a high demand for individualized products at price levels comparable...     

The allometry of saguaro height

The allometry of plant height H with respect to mean stem diameter D was determined based on 118 saguaro plants. The slope obtained for the reduced major axis regression analysis of the data was 2.36 ± 0.085, indicating that taller plants are disproportionately more slender than their shorter, presumably younger counterparts. The consequences of this positive, extremely anisometric relation on the elastic stability of stems were estimated by computing the critical buckling height H_crit for each of the 118 stems on the basis of the mean density-specific stiffness (i.e., the quotient of Young's elastic modulus E and bulk tissue density ρ) determined for a single section from a mature saguaro stem. E/ρ was nearly equivalent to that of tissue samples of sclerenchyma isolated from other plant species. Since the slope of H_crit vs. D equals ≈ 0.67 when E/ρ ≈ a constant, the safety-factor for saguaro stems (i.e., H_crit/H) appeared to be size-dependent such that it decreased with increasing plant height (i.e., H_crit/H ≈ D^-1.65). However, the mean safety-factor computed for the 118 saguaro specimens was 9.64, indicating that, on the average, plant height was well below H_crit. Additionally, circumstantial evidence suggests that saguaro stems become more stiff as they increase in size (and age) and that the rate of stem growth decelerates over time. The former would obtain a near size-independent safety-factor against elastic buckling while the latter protracts the time required to reach the critical buckling height. Comparisons among the allometries of H and H_crit for saguaro, other cacti, nonwoody, and highly branched tree species indicated that saguaro size overlaps with the lower size-range of the largest known dicot and gymnosperm tree specimens likely as a consequence of the high E/ρ of mature saguaro stems.     

DEPENDENCY OF THE TENSILE MODULUS ON TRANSVERSE DIMENSIONS,WATER POTENTIAL,AND CELL NUMBER OF PITH PARENCHYMA

Uniaxial tensile tests of solid and hollow cylindrical plugs of pith parenchyma from potato tubers indicate the tensile modulus of elasticity, E, can vary significantly as a function of tissue transverse area and water potential. E increases from 1.2 to 19 MPa as ψ_w changes from -1.4 to -0.4 MPa. E increases from 5 to 19 MPa as transverse area of solid tissue sample increases from 0.2 to 2.5 cm². Variations in E accompanying changes in transverse area appear to be related to cell number along the radii of plugs. Hollow cylindrical plugs for which wall thickness is maintained but total tissue area is changed show constant values of E. It is suggested that shear stresses within tissue samples influence E and are dependent upon cell number and tissue water content. Material with these properties would be a “poor choice” for constructing plant organs experiencing repeated stress and periodic dehydration. However, ground tissue may act as a buffer against localized ovaling of stem and leaf cross sections under loading.     

The fluidity of DOPC bilayers and membrane fractions prepared from murine plasmacytoma cells is unchanged after incorporation of pristane (2,6,10,14-tetramethylpentadecane) as assessed by fluorescence polarization analysis.

The nature of the plasmacytomagenic activity of pristane (2,6,10,14-tetramethylpentadecane) is poorly defined. However, evidence for tumor promoting properties of pristane has recently come forward that includes direct cellular effects on B lymphocytes; i.e., the plasmacytoma precursor cell. Bly et al. (Cancer Biochem. Biophys. 11, 1990, 145-154) observed changed membrane fluidities in lymphocytes after administration of pristane in vivo. We measured steady-state fluorescence polarization using DPH (1,6-diphenyl-1,3,5-hexatriene) and APCL (1-acyl-2-[12-(9-anthryl)-11-trans-dodecenoyl]-sn-glycero-3- phosphocholine) as probes in DOPC (L-alpha-dioleoylphosphatidylcholin) model membranes and membrane fractions derived from plasmacytoma cells after incorporation of pristane in vitro. In a previous investigation, we verified the in vitro uptake of pristane into DOPC bilayers under the conditions employed here (Gawrisch and Janz, Biochim. Biophys. Acta 1070, 1991, 409-418). However, neither in DOPC bilayers nor in plasmacytoma membrane fractions could we detect changes in fluorescence polarization after in vitro incorporation of pristane within reasonable error limits. Therefore, we suggest that the observed alterations in membrane fluidity in lymphocytes from pristane-treated animals are the indirect result of the in vivo treatment but not a direct effect of pristane on membrane fluidity.     

Application of CRISPR/Cas-mediated base editing for directed protein evolution in plants

Science China Life Sciences -     

Application of gas diffusion electrodes in bioeconomy: An update

The transition of today's fossil fuel based chemical industry toward sustainable production requires improvement of established production processes as well as development of new sustainable and bio-based synthesis routes within a circular economy. Thereby, the combination of electrochemical and biotechnological advantages in such routes represents one important keystone. For the electrochemical generation of reactants from gaseous substrates such as O₂ or CO₂, gas diffusion electrodes (GDE) represent the electrodes of choice since they overcome solubility-based mass transport limitations. Within this article, we illustrate the architecture, function principle and fabrication of GDE. We highlight the application of GDE for conversion of CO₂ using abiotic catalysts for subsequent biosynthesis as well as the application of microbial catalysts at GDE for CO₂ conversion. The reduction of oxygen at GDE is summarized for the application of oxygen depolarized cathodes in microbial fuel cells and generation of H₂O₂ to drive enzymatic reactions. Finally, engineering aspects such as scale-up and the modeling of GDE-based processes are described. This review presents an update on the application of GDE in bio-based production systems and emphasizes their large potential for sustainable development of new pathways in bioeconomy.